Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TSPY12P-201ENST00000421279 868 ntBASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 AL109923.1-201ENST00000618799 583 ntBASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 AC019129.2-201ENST00000609837 1235 ntBASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L1Q8WWY6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 AC002310.6-201ENST00000624451 1377 ntBASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
MBD3L1Q8WWY6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms