Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 AL133445.2-201ENST00000611191 527 ntBASIC17.26■□□□□ 0.35
PTCD2Q8WV60 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 AL022326.1-202ENST00000641533 845 ntBASIC17.26■□□□□ 0.35
PTCD2Q8WV60 AC107918.4-202ENST00000641623 219 ntBASIC17.26■□□□□ 0.35
PTCD2Q8WV60 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 AL391005.1-201ENST00000623953 2435 ntBASIC17.26■□□□□ 0.35
PTCD2Q8WV60 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCD2Q8WV60 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 AC092910.1-201ENST00000482027 1129 ntBASIC17.25■□□□□ 0.35
PTCD2Q8WV60 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCD2Q8WV60 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 LINC00982-205ENST00000420957 435 ntBASIC17.24■□□□□ 0.35
PTCD2Q8WV60 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCD2Q8WV60 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms