Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLHC1Q8NHS4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 NPAP1P7-201ENST00000613027 823 ntBASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLHC1Q8NHS4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AL020989.1-201ENST00000422979 469 ntBASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AC004817.3-201ENST00000602957 2129 ntBASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AC069148.1-201ENST00000608741 768 ntBASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AC097637.2-201ENST00000624096 1997 ntBASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 DOC2GP-204ENST00000639052 2548 ntBASIC16.35■□□□□ 0.21
CLHC1Q8NHS4 AC011270.2-201ENST00000624293 2550 ntBASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms