Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 ACTG1P4-201ENST00000425123 1122 ntBASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 HCG4P8-203ENST00000443049 980 ntBASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 FOSL1P1-201ENST00000511041 816 ntBASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 AP001269.4-201ENST00000609611 512 ntBASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 AC011270.2-201ENST00000624293 2550 ntBASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF439Q8NDP4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AC132008.2-207ENST00000454517 770 ntBASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AP005117.1-201ENST00000584346 1413 ntBASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms