Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 AL022342.1-201ENST00000400363 863 ntBASIC17.41■□□□□ 0.38
RTL3Q8N8U3 IGLL3P-201ENST00000412472 434 ntBASIC17.41■□□□□ 0.38
RTL3Q8N8U3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL3Q8N8U3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 FAM185BP-201ENST00000443595 716 ntBASIC17.4■□□□□ 0.38
RTL3Q8N8U3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL3Q8N8U3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RTL3Q8N8U3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
RTL3Q8N8U3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 CXCL1P1-201ENST00000502804 216 ntBASIC17.39■□□□□ 0.37
RTL3Q8N8U3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AP002490.2-201ENST00000524791 560 ntBASIC17.39■□□□□ 0.37
RTL3Q8N8U3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AC005412.3-201ENST00000580309 715 ntBASIC17.39■□□□□ 0.37
RTL3Q8N8U3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AC064836.3-201ENST00000607928 673 ntBASIC17.39■□□□□ 0.37
RTL3Q8N8U3 ACTL9-202ENST00000612068 1252 ntBASIC17.39■□□□□ 0.37
RTL3Q8N8U3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTL3Q8N8U3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTL3Q8N8U3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms