Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCNYL1Q8N7R7 AC006449.5-201ENST00000610658 2098 ntBASIC16.84■□□□□ 0.29
CCNYL1Q8N7R7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CCNYL1Q8N7R7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL1Q8N7R7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL1Q8N7R7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL1Q8N7R7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL1Q8N7R7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.83■□□□□ 0.29
CCNYL1Q8N7R7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 RN7SL850P-201ENST00000579959 291 ntBASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL1Q8N7R7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 CICP6-201ENST00000457191 2729 ntBASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AL136038.3-201ENST00000561909 1096 ntBASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AC073592.5-201ENST00000624854 528 ntBASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL1Q8N7R7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 AC246785.2-201ENST00000432512 513 ntBASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 FLJ16779-201ENST00000612722 7638 ntBASIC16.81■□□□□ 0.28
CCNYL1Q8N7R7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms