Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 MRPL20P1-201ENST00000400819 433 ntBASIC13.76□□□□□ -0.21
LINC00311Q8N616 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 AC107918.2-201ENST00000530817 355 ntBASIC13.76□□□□□ -0.21
LINC00311Q8N616 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 AC005412.3-201ENST00000580309 715 ntBASIC13.76□□□□□ -0.21
LINC00311Q8N616 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 RNF216P1-203ENST00000404404 2427 ntBASIC13.76□□□□□ -0.21
LINC00311Q8N616 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00311Q8N616 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00311Q8N616 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.75□□□□□ -0.21
LINC00311Q8N616 PRSS29P-201ENST00000440800 595 ntBASIC13.75□□□□□ -0.21
LINC00311Q8N616 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 RNA5SP419-201ENST00000515908 135 ntBASIC13.75□□□□□ -0.21
LINC00311Q8N616 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 MIR7706-201ENST00000613747 67 ntBASIC13.75□□□□□ -0.21
LINC00311Q8N616 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 AC117500.6-201ENST00000624871 588 ntBASIC13.75□□□□□ -0.21
LINC00311Q8N616 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00311Q8N616 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 AC006538.1-201ENST00000567905 1585 ntBASIC13.75□□□□□ -0.21
LINC00311Q8N616 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00311Q8N616 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00311Q8N616 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 MRPL3P1-201ENST00000400109 1033 ntBASIC13.74□□□□□ -0.21
LINC00311Q8N616 HCG4-201ENST00000418983 998 ntBASIC13.74□□□□□ -0.21
LINC00311Q8N616 AC108073.2-201ENST00000464002 357 ntBASIC13.74□□□□□ -0.21
LINC00311Q8N616 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00311Q8N616 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms