Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 TIMM8BP1-201ENST00000452384 211 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AC107918.2-201ENST00000530817 355 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AC022145.2-201ENST00000598203 171 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AL121761.2-201ENST00000598007 1648 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHPFQ8IZ52 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 AL139400.1-201ENST00000366220 510 ntBASIC17.27■□□□□ 0.36
CHPFQ8IZ52 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CHPFQ8IZ52 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.27■□□□□ 0.35
CHPFQ8IZ52 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHPFQ8IZ52 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHPFQ8IZ52 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHPFQ8IZ52 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHPFQ8IZ52 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms