Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CROCCP3Q8IVE0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CROCCP3Q8IVE0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.46■□□□□ 0.06
CROCCP3Q8IVE0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 AC009949.1-201ENST00000623048 1830 ntBASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 AP002414.2-201ENST00000591780 3365 ntBASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 AC104390.1-201ENST00000555663 520 ntBASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.45■□□□□ 0.06
CROCCP3Q8IVE0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 AC069152.1-201ENST00000438030 544 ntBASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 AC011506.1-201ENST00000474329 610 ntBASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 AL137784.2-201ENST00000607332 1000 ntBASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CROCCP3Q8IVE0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 AC092053.1-201ENST00000605787 1936 ntBASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms