Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
LRRC49Q8IUZ0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC49Q8IUZ0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC49Q8IUZ0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 AC005915.1-201ENST00000624912 2018 ntBASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC49Q8IUZ0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 AC010654.1-201ENST00000615722 808 ntBASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LRRC49Q8IUZ0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 FDX1P1-201ENST00000449115 551 ntBASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 AC108073.2-201ENST00000464002 357 ntBASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 IGHV3-22-201ENST00000520721 359 ntBASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 AC005412.3-201ENST00000580309 715 ntBASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 AL049840.3-201ENST00000602669 611 ntBASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC49Q8IUZ0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC49Q8IUZ0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms