Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AC139887.3-201ENST00000568585 713 ntBASIC11.32□□□□□ -0.6
SCXQ7RTU7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SCXQ7RTU7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SCXQ7RTU7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 RPS2P28-201ENST00000314255 741 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 MIR574-201ENST00000385209 96 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 ABCD1P5-201ENST00000445663 754 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.31□□□□□ -0.6
SCXQ7RTU7 AC006538.3-201ENST00000612495 578 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 FAM215A-202ENST00000632077 792 ntBASIC11.31□□□□□ -0.6
SCXQ7RTU7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms