Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 AC010336.2-201ENST00000564226 506 ntBASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
OTOP1Q7RTM1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 SPTLC1P1-201ENST00000447199 261 ntBASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
OTOP1Q7RTM1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 TSSK5P-201ENST00000423978 907 ntBASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 ALG1L8P-201ENST00000533887 760 ntBASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 AL138688.1-201ENST00000624851 1594 ntBASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OTOP1Q7RTM1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 AC100757.3-201ENST00000622361 1406 ntBASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 AC084346.2-201ENST00000607097 949 ntBASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 AL590560.3-201ENST00000623350 461 ntBASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OTOP1Q7RTM1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.53■□□□□ 0.72
OTOP1Q7RTM1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms