Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CREB3L3Q68CJ9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CREB3L3Q68CJ9 TOP3BP1-201ENST00000420768 1380 ntBASIC20.2■□□□□ 0.82
CREB3L3Q68CJ9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CREB3L3Q68CJ9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CREB3L3Q68CJ9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AL356488.2-201ENST00000602755 427 ntBASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
CREB3L3Q68CJ9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 AL049840.3-201ENST00000602669 611 ntBASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CREB3L3Q68CJ9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 AC006277.1-201ENST00000624348 1610 ntBASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 AL160237.2-201ENST00000556165 472 ntBASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 AC008667.4-201ENST00000607370 168 ntBASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.17■□□□□ 0.82
CREB3L3Q68CJ9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CREB3L3Q68CJ9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms