Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 HLA-A-202ENST00000376806 1854 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 RPS15P9-201ENST00000494093 319 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 RNA5SP419-201ENST00000515908 135 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 AP002469.2-201ENST00000531724 424 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 FAM215A-202ENST00000632077 792 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 PCDHB19P-201ENST00000570871 2371 ntBASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF9Q5VWM5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 LINC00895-201ENST00000629028 1637 ntBASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 MRPL3P1-201ENST00000400109 1033 ntBASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF9Q5VWM5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 SNX33P1-201ENST00000592116 1762 ntBASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.33■□□□□ 0.21
PRAMEF9Q5VWM5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 AC136632.2-201ENST00000512891 861 ntBASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF9Q5VWM5 AF228730.7-201ENST00000641842 219 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms