Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 AL009178.2-201ENST00000597278 2719 ntBASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PRORSD1P-201ENST00000295112 541 ntBASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 AC112698.1-201ENST00000510299 916 ntBASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 AL359736.2-201ENST00000621992 437 ntBASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ERCC6LQ2NKX8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 ABHD17AP1-201ENST00000358206 933 ntBASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 CRYGFP-201ENST00000418459 633 ntBASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 AC142381.4-202ENST00000563973 229 ntBASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC6LQ2NKX8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 FAM197Y1-201ENST00000421178 764 ntBASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ERCC6LQ2NKX8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms