Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CBX1P83916 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX1P83916 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX1P83916 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX1P83916 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX1P83916 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CBX1P83916 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CBX1P83916 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CBX1P83916 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.78■□□□□ 0.44
CBX1P83916 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CBX1P83916 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 CYP2T1P-201ENST00000432607 1285 ntBASIC17.78■□□□□ 0.44
CBX1P83916 BID-214ENST00000617586 542 ntTSL 5 BASIC17.78■□□□□ 0.44
CBX1P83916 AC008694.1-202ENST00000636953 945 ntBASIC17.78■□□□□ 0.44
CBX1P83916 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.78■□□□□ 0.44
CBX1P83916 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CBX1P83916 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CBX1P83916 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX1P83916 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX1P83916 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CBX1P83916 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CBX1P83916 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.77■□□□□ 0.44
CBX1P83916 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 LINC00552-201ENST00000625151 2579 ntBASIC17.77■□□□□ 0.44
CBX1P83916 CICP23-201ENST00000605013 2741 ntBASIC17.77■□□□□ 0.44
CBX1P83916 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.77■□□□□ 0.44
CBX1P83916 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.77■□□□□ 0.44
CBX1P83916 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.77■□□□□ 0.44
CBX1P83916 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CBX1P83916 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CBX1P83916 AC010980.2-201ENST00000587099 1412 ntBASIC17.77■□□□□ 0.44
CBX1P83916 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.77■□□□□ 0.44
CBX1P83916 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CBX1P83916 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.77■□□□□ 0.43
CBX1P83916 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CBX1P83916 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.77■□□□□ 0.43
CBX1P83916 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.77■□□□□ 0.43
CBX1P83916 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.77■□□□□ 0.43
CBX1P83916 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX1P83916 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.76■□□□□ 0.43
CBX1P83916 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms