Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CYP2D8P-201ENST00000433633 1490 ntBASIC12.07□□□□□ -0.48
RPL39P62891 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.07□□□□□ -0.48
RPL39P62891 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RPL39P62891 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
RPL39P62891 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RPL39P62891 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
RPL39P62891 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 AL645728.1-201ENST00000366221 2101 ntBASIC12.06□□□□□ -0.48
RPL39P62891 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 HMGA1P5-201ENST00000412453 271 ntBASIC12.06□□□□□ -0.48
RPL39P62891 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 GCSHP5-201ENST00000443090 522 ntBASIC12.06□□□□□ -0.48
RPL39P62891 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.06□□□□□ -0.48
RPL39P62891 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 AC019129.2-201ENST00000609837 1235 ntBASIC12.06□□□□□ -0.48
RPL39P62891 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.06□□□□□ -0.48
RPL39P62891 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RPL39P62891 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 FRMD8P1-201ENST00000440433 1524 ntBASIC12.06□□□□□ -0.48
RPL39P62891 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.06□□□□□ -0.48
RPL39P62891 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RPL39P62891 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RPL39P62891 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 AC023824.1-201ENST00000562945 2975 ntBASIC12.05□□□□□ -0.48
RPL39P62891 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.05□□□□□ -0.48
RPL39P62891 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RPL39P62891 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RPL39P62891 ECEL1P3-201ENST00000427961 737 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms