Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC023141.5-201ENST00000458585 616 ntBASIC16.73■□□□□ 0.27
CLDN2P57739 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CLDN2P57739 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN2P57739 AC109322.1-201ENST00000524499 1264 ntBASIC16.73■□□□□ 0.27
CLDN2P57739 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 DUX4L17-201ENST00000557360 1267 ntBASIC16.73■□□□□ 0.27
CLDN2P57739 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN2P57739 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLDN2P57739 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 AC005237.2-201ENST00000434368 219 ntBASIC16.72■□□□□ 0.27
CLDN2P57739 AC079140.1-201ENST00000508039 487 ntBASIC16.72■□□□□ 0.27
CLDN2P57739 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN2P57739 FAM86C2P-203ENST00000528684 1004 ntBASIC16.72■□□□□ 0.27
CLDN2P57739 AL135744.1-201ENST00000565098 629 ntBASIC16.72■□□□□ 0.27
CLDN2P57739 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN2P57739 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN2P57739 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN2P57739 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN2P57739 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN2P57739 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CLDN2P57739 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN2P57739 FRMD8P1-201ENST00000440433 1524 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN2P57739 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 AL627223.1-201ENST00000416693 442 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN2P57739 AL592309.1-201ENST00000443127 649 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN2P57739 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN2P57739 AC243562.1-201ENST00000560672 389 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.71■□□□□ 0.27
CLDN2P57739 AL009183.1-201ENST00000603760 355 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 LINC00628-201ENST00000628516 1289 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 TOP3BP1-201ENST00000420768 1380 ntBASIC16.71■□□□□ 0.27
CLDN2P57739 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN2P57739 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN2P57739 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN2P57739 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN2P57739 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.71■□□□□ 0.26
CLDN2P57739 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.71■□□□□ 0.26
CLDN2P57739 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms