Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.09■□□□□ 0.17
WNT3P56703 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3P56703 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.09■□□□□ 0.17
WNT3P56703 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3P56703 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3P56703 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3P56703 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3P56703 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.08■□□□□ 0.17
WNT3P56703 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3P56703 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 AC132008.2-207ENST00000454517 770 ntBASIC16.08■□□□□ 0.16
WNT3P56703 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3P56703 AL121912.1-201ENST00000603683 238 ntBASIC16.08■□□□□ 0.16
WNT3P56703 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 TP73-AS1-207ENST00000624167 988 ntBASIC16.08■□□□□ 0.16
WNT3P56703 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.08■□□□□ 0.16
WNT3P56703 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
WNT3P56703 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
WNT3P56703 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3P56703 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 AC079328.2-201ENST00000561241 3354 ntBASIC16.07■□□□□ 0.16
WNT3P56703 AC026691.1-201ENST00000602502 2017 ntBASIC16.07■□□□□ 0.16
WNT3P56703 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.07■□□□□ 0.16
WNT3P56703 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.07■□□□□ 0.16
WNT3P56703 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.07■□□□□ 0.16
WNT3P56703 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 BX005266.1-201ENST00000473402 457 ntBASIC16.07■□□□□ 0.16
WNT3P56703 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
WNT3P56703 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.07■□□□□ 0.16
WNT3P56703 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.07■□□□□ 0.16
WNT3P56703 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 SLC25A6P4-201ENST00000586535 553 ntBASIC16.07■□□□□ 0.16
WNT3P56703 TERC-201ENST00000602385 541 ntBASIC16.07■□□□□ 0.16
WNT3P56703 REXO1L6P-202ENST00000619970 1078 ntBASIC16.07■□□□□ 0.16
WNT3P56703 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 AC243591.1-201ENST00000452967 1364 ntBASIC16.07■□□□□ 0.16
WNT3P56703 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 ALOX12P2-203ENST00000570921 1945 ntBASIC16.07■□□□□ 0.16
WNT3P56703 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.07■□□□□ 0.16
WNT3P56703 CYP2T1P-202ENST00000641596 2535 ntBASIC16.07■□□□□ 0.16
WNT3P56703 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
WNT3P56703 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
WNT3P56703 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3P56703 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
WNT3P56703 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
WNT3P56703 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
WNT3P56703 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
WNT3P56703 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
WNT3P56703 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms