Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
PKNOX1P55347 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PKNOX1P55347 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PKNOX1P55347 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PKNOX1P55347 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
PKNOX1P55347 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 FAM86EP-206ENST00000510506 987 ntBASIC16.73■□□□□ 0.27
PKNOX1P55347 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.73■□□□□ 0.27
PKNOX1P55347 Z69720.1-201ENST00000601483 472 ntBASIC16.73■□□□□ 0.27
PKNOX1P55347 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.73■□□□□ 0.27
PKNOX1P55347 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PKNOX1P55347 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.73■□□□□ 0.27
PKNOX1P55347 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.73■□□□□ 0.27
PKNOX1P55347 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PKNOX1P55347 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.73■□□□□ 0.27
PKNOX1P55347 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PKNOX1P55347 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PKNOX1P55347 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.72■□□□□ 0.27
PKNOX1P55347 KRT18P1-202ENST00000452408 1331 ntBASIC16.72■□□□□ 0.27
PKNOX1P55347 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.72■□□□□ 0.27
PKNOX1P55347 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PKNOX1P55347 FRMD8P1-201ENST00000440433 1524 ntBASIC16.72■□□□□ 0.27
PKNOX1P55347 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PKNOX1P55347 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PKNOX1P55347 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 TSSC2-201ENST00000450217 709 ntBASIC16.72■□□□□ 0.27
PKNOX1P55347 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.72■□□□□ 0.27
PKNOX1P55347 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKNOX1P55347 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.72■□□□□ 0.27
PKNOX1P55347 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKNOX1P55347 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
PKNOX1P55347 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PKNOX1P55347 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PKNOX1P55347 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PKNOX1P55347 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.71■□□□□ 0.27
PKNOX1P55347 DRAXINP1-201ENST00000437611 948 ntBASIC16.71■□□□□ 0.27
PKNOX1P55347 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.71■□□□□ 0.27
PKNOX1P55347 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.71■□□□□ 0.27
PKNOX1P55347 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PKNOX1P55347 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.71■□□□□ 0.27
PKNOX1P55347 AC116407.4-201ENST00000623319 1061 ntBASIC16.71■□□□□ 0.27
PKNOX1P55347 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PKNOX1P55347 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PKNOX1P55347 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PKNOX1P55347 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.71■□□□□ 0.27
PKNOX1P55347 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKNOX1P55347 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms