Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.19■□□□□ 0.18
NR1H2P55055 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H2P55055 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H2P55055 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NR1H2P55055 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H2P55055 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NR1H2P55055 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NR1H2P55055 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 MIR564-202ENST00000385049 94 ntBASIC16.18■□□□□ 0.18
NR1H2P55055 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 ATP5G2P1-201ENST00000433580 426 ntBASIC16.18■□□□□ 0.18
NR1H2P55055 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NR1H2P55055 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
NR1H2P55055 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
NR1H2P55055 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 AC144831.1-201ENST00000573312 2656 ntBASIC16.18■□□□□ 0.18
NR1H2P55055 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H2P55055 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H2P55055 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
NR1H2P55055 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NR1H2P55055 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.17■□□□□ 0.18
NR1H2P55055 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NR1H2P55055 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NR1H2P55055 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 SEC1P-202ENST00000473944 940 ntBASIC16.17■□□□□ 0.18
NR1H2P55055 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.17■□□□□ 0.18
NR1H2P55055 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NR1H2P55055 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H2P55055 AC046185.3-201ENST00000623228 1824 ntBASIC16.17■□□□□ 0.18
NR1H2P55055 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NR1H2P55055 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NR1H2P55055 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H2P55055 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H2P55055 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H2P55055 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NR1H2P55055 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms