Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PDE1AP54750 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDE1AP54750 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE1AP54750 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE1AP54750 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.73■□□□□ 0.91
PDE1AP54750 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE1AP54750 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE1AP54750 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.72■□□□□ 0.91
PDE1AP54750 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.72■□□□□ 0.91
PDE1AP54750 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.72■□□□□ 0.91
PDE1AP54750 MIR4492-201ENST00000581627 80 ntBASIC20.72■□□□□ 0.91
PDE1AP54750 SLC25A6P4-201ENST00000586535 553 ntBASIC20.72■□□□□ 0.91
PDE1AP54750 GGTLC5P-201ENST00000617623 998 ntBASIC20.72■□□□□ 0.91
PDE1AP54750 MIR1199-201ENST00000621445 119 ntBASIC20.72■□□□□ 0.91
PDE1AP54750 AC117500.6-201ENST00000624871 588 ntBASIC20.72■□□□□ 0.91
PDE1AP54750 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE1AP54750 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PDE1AP54750 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE1AP54750 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 RPS2P28-201ENST00000314255 741 ntBASIC20.71■□□□□ 0.91
PDE1AP54750 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PDE1AP54750 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PDE1AP54750 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 AC009078.2-202ENST00000463353 338 ntBASIC20.71■□□□□ 0.91
PDE1AP54750 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 OR7E47P-204ENST00000575924 449 ntBASIC20.71■□□□□ 0.91
PDE1AP54750 MPDU1-223ENST00000582151 728 ntBASIC20.71■□□□□ 0.91
PDE1AP54750 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 SNX33P1-201ENST00000592116 1762 ntBASIC20.71■□□□□ 0.91
PDE1AP54750 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDE1AP54750 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.71■□□□□ 0.91
PDE1AP54750 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1AP54750 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PDE1AP54750 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.7■□□□□ 0.9
PDE1AP54750 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
PDE1AP54750 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PDE1AP54750 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDE1AP54750 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE1AP54750 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.7■□□□□ 0.9
PDE1AP54750 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.7■□□□□ 0.9
PDE1AP54750 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.7■□□□□ 0.9
PDE1AP54750 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.7■□□□□ 0.9
PDE1AP54750 PGM5P2-202ENST00000637225 1043 ntBASIC20.7■□□□□ 0.9
PDE1AP54750 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1AP54750 SLC22A20-204ENST00000530038 1673 ntBASIC20.7■□□□□ 0.9
PDE1AP54750 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.7■□□□□ 0.9
PDE1AP54750 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
PDE1AP54750 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE1AP54750 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDE1AP54750 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PDE1AP54750 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PDE1AP54750 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1AP54750 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE1AP54750 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms