Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NUP98P52948 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NUP98P52948 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.94
NUP98P52948 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NUP98P52948 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NUP98P52948 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.89■□□□□ 0.93
NUP98P52948 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.89■□□□□ 0.93
NUP98P52948 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.89■□□□□ 0.93
NUP98P52948 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.89■□□□□ 0.93
NUP98P52948 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.89■□□□□ 0.93
NUP98P52948 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.89■□□□□ 0.93
NUP98P52948 AL133215.2-201ENST00000609242 977 ntBASIC20.89■□□□□ 0.93
NUP98P52948 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP98P52948 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NUP98P52948 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.88■□□□□ 0.93
NUP98P52948 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.88■□□□□ 0.93
NUP98P52948 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.88■□□□□ 0.93
NUP98P52948 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.88■□□□□ 0.93
NUP98P52948 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
NUP98P52948 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.88■□□□□ 0.93
NUP98P52948 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.88■□□□□ 0.93
NUP98P52948 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
NUP98P52948 RN7SL692P-201ENST00000464677 288 ntBASIC20.88■□□□□ 0.93
NUP98P52948 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.88■□□□□ 0.93
NUP98P52948 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP98P52948 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP98P52948 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.87■□□□□ 0.93
NUP98P52948 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP98P52948 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUP98P52948 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.87■□□□□ 0.93
NUP98P52948 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.87■□□□□ 0.93
NUP98P52948 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP98P52948 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUP98P52948 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NUP98P52948 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.87■□□□□ 0.93
NUP98P52948 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUP98P52948 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.87■□□□□ 0.93
NUP98P52948 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.87■□□□□ 0.93
NUP98P52948 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP98P52948 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.87■□□□□ 0.93
NUP98P52948 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NUP98P52948 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.86■□□□□ 0.93
NUP98P52948 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NUP98P52948 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.86■□□□□ 0.93
NUP98P52948 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NUP98P52948 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.86■□□□□ 0.93
NUP98P52948 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.86■□□□□ 0.93
NUP98P52948 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NUP98P52948 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
NUP98P52948 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.86■□□□□ 0.93
NUP98P52948 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NUP98P52948 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.86■□□□□ 0.93
NUP98P52948 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.86■□□□□ 0.93
NUP98P52948 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP98P52948 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NUP98P52948 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.86■□□□□ 0.93
NUP98P52948 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP98P52948 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP98P52948 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
NUP98P52948 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.85■□□□□ 0.93
NUP98P52948 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUP98P52948 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.85■□□□□ 0.93
NUP98P52948 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.85■□□□□ 0.93
NUP98P52948 AC009118.2-201ENST00000613275 655 ntBASIC20.85■□□□□ 0.93
NUP98P52948 SPTSSB-204ENST00000617024 1292 ntBASIC20.85■□□□□ 0.93
NUP98P52948 KRT8P39-201ENST00000396270 1433 ntBASIC20.85■□□□□ 0.93
NUP98P52948 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP98P52948 PCDHB17P-201ENST00000539533 2393 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms