Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF144AP50876 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF144AP50876 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF144AP50876 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.84■□□□□ 0.13
RNF144AP50876 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RNF144AP50876 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 FGFR3P6-201ENST00000457012 610 ntBASIC15.84■□□□□ 0.13
RNF144AP50876 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF144AP50876 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.84■□□□□ 0.13
RNF144AP50876 AC106795.1-205ENST00000512851 1056 ntBASIC15.84■□□□□ 0.13
RNF144AP50876 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF144AP50876 REXO1L6P-202ENST00000619970 1078 ntBASIC15.84■□□□□ 0.13
RNF144AP50876 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF144AP50876 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF144AP50876 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF144AP50876 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RNF144AP50876 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RNF144AP50876 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF144AP50876 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF144AP50876 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF144AP50876 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF144AP50876 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RNF144AP50876 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
RNF144AP50876 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF144AP50876 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RNF144AP50876 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RNF144AP50876 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 AGGF1P2-201ENST00000426656 2106 ntBASIC15.83■□□□□ 0.12
RNF144AP50876 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF144AP50876 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF144AP50876 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF144AP50876 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF144AP50876 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF144AP50876 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF144AP50876 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF144AP50876 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF144AP50876 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF144AP50876 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.82■□□□□ 0.12
RNF144AP50876 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF144AP50876 AL355877.3-201ENST00000622820 899 ntBASIC15.82■□□□□ 0.12
RNF144AP50876 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms