Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.89■□□□□ 0.3
HMGCLP35914 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCLP35914 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCLP35914 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCLP35914 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.89■□□□□ 0.29
HMGCLP35914 CXCL1P1-201ENST00000502804 216 ntBASIC16.89■□□□□ 0.29
HMGCLP35914 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 MPDU1-223ENST00000582151 728 ntBASIC16.89■□□□□ 0.29
HMGCLP35914 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
HMGCLP35914 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.89■□□□□ 0.29
HMGCLP35914 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCLP35914 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HMGCLP35914 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HMGCLP35914 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
HMGCLP35914 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HMGCLP35914 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCLP35914 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 ACTL9-202ENST00000612068 1252 ntBASIC16.88■□□□□ 0.29
HMGCLP35914 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCLP35914 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
HMGCLP35914 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCLP35914 AL391256.1-201ENST00000443260 1855 ntBASIC16.88■□□□□ 0.29
HMGCLP35914 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 AC006277.1-201ENST00000624348 1610 ntBASIC16.88■□□□□ 0.29
HMGCLP35914 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCLP35914 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCLP35914 AC131009.4-201ENST00000624048 1740 ntBASIC16.87■□□□□ 0.29
HMGCLP35914 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HMGCLP35914 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCLP35914 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
HMGCLP35914 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMGCLP35914 IGLL3P-201ENST00000412472 434 ntBASIC16.87■□□□□ 0.29
HMGCLP35914 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.87■□□□□ 0.29
HMGCLP35914 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCLP35914 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.87■□□□□ 0.29
HMGCLP35914 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.87■□□□□ 0.29
HMGCLP35914 AC096734.2-201ENST00000562054 433 ntBASIC16.87■□□□□ 0.29
HMGCLP35914 MIR4492-201ENST00000581627 80 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms