Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT9P35527 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT9P35527 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.64■□□□□ 0.57
KRT9P35527 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 BNIP3P18-201ENST00000593976 575 ntBASIC18.64■□□□□ 0.57
KRT9P35527 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.64■□□□□ 0.57
KRT9P35527 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
KRT9P35527 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT9P35527 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT9P35527 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT9P35527 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT9P35527 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KRT9P35527 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT9P35527 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT9P35527 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT9P35527 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT9P35527 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT9P35527 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KRT9P35527 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT9P35527 POM121L3P-201ENST00000419331 1163 ntBASIC18.63■□□□□ 0.57
KRT9P35527 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
KRT9P35527 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 CYP2T1P-202ENST00000641596 2535 ntBASIC18.63■□□□□ 0.57
KRT9P35527 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT9P35527 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT9P35527 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
KRT9P35527 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KRT9P35527 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 RCN1P2-201ENST00000398357 915 ntBASIC18.62■□□□□ 0.57
KRT9P35527 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.62■□□□□ 0.57
KRT9P35527 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.62■□□□□ 0.57
KRT9P35527 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.62■□□□□ 0.57
KRT9P35527 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.62■□□□□ 0.57
KRT9P35527 AC099336.1-202ENST00000602961 463 ntBASIC18.62■□□□□ 0.57
KRT9P35527 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT9P35527 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 AC132938.5-201ENST00000624980 1813 ntBASIC18.62■□□□□ 0.57
KRT9P35527 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT9P35527 INTS4P1-201ENST00000438455 1935 ntBASIC18.62■□□□□ 0.57
KRT9P35527 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT9P35527 AL645728.1-201ENST00000366221 2101 ntBASIC18.62■□□□□ 0.57
KRT9P35527 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
KRT9P35527 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT9P35527 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT9P35527 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
KRT9P35527 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT9P35527 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms