Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 METTL21AP1-201ENST00000438852 635 ntBASIC15.12■□□□□ 0.01
HOXC12P31275 CYMP-203ENST00000474680 1263 ntBASIC15.12■□□□□ 0.01
HOXC12P31275 RFPL4AP1-201ENST00000530883 850 ntBASIC15.12■□□□□ 0.01
HOXC12P31275 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.12■□□□□ 0.01
HOXC12P31275 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.12■□□□□ 0.01
HOXC12P31275 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
HOXC12P31275 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HOXC12P31275 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HOXC12P31275 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.12■□□□□ 0.01
HOXC12P31275 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.12■□□□□ 0.01
HOXC12P31275 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.12■□□□□ 0.01
HOXC12P31275 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HOXC12P31275 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HOXC12P31275 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HOXC12P31275 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HOXC12P31275 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.11■□□□□ 0.01
HOXC12P31275 HTR5BP-201ENST00000430851 1154 ntBASIC15.11■□□□□ 0.01
HOXC12P31275 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 AC005829.1-201ENST00000570002 483 ntBASIC15.11■□□□□ 0.01
HOXC12P31275 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.11■□□□□ 0.01
HOXC12P31275 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 AL596442.2-201ENST00000610240 980 ntBASIC15.11■□□□□ 0.01
HOXC12P31275 GPR89P-201ENST00000407924 1495 ntBASIC15.11■□□□□ 0.01
HOXC12P31275 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.11■□□□□ 0.01
HOXC12P31275 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.11■□□□□ 0.01
HOXC12P31275 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HOXC12P31275 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HOXC12P31275 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HOXC12P31275 AC016396.2-201ENST00000562575 1417 ntBASIC15.1■□□□□ 0.01
HOXC12P31275 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HOXC12P31275 FZD10-202ENST00000539839 3282 ntBASIC15.1■□□□□ 0.01
HOXC12P31275 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HOXC12P31275 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.1■□□□□ 0.01
HOXC12P31275 MCCD1P2-201ENST00000423228 335 ntBASIC15.1■□□□□ 0.01
HOXC12P31275 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.1■□□□□ 0.01
HOXC12P31275 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.1■□□□□ 0.01
HOXC12P31275 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.1■□□□□ 0.01
HOXC12P31275 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.1■□□□□ 0.01
HOXC12P31275 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.1■□□□□ 0.01
HOXC12P31275 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.1■□□□□ 0.01
HOXC12P31275 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.1■□□□□ 0.01
HOXC12P31275 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.1■□□□□ 0.01
HOXC12P31275 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.1■□□□□ 0.01
HOXC12P31275 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HOXC12P31275 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms