Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.9■□□□□ 0.62
CTGFP29279 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.9■□□□□ 0.62
CTGFP29279 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.9■□□□□ 0.62
CTGFP29279 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.9■□□□□ 0.62
CTGFP29279 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.9■□□□□ 0.62
CTGFP29279 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.9■□□□□ 0.62
CTGFP29279 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTGFP29279 MIR6775-201ENST00000617557 69 ntBASIC18.9■□□□□ 0.62
CTGFP29279 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CTGFP29279 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CTGFP29279 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.9■□□□□ 0.62
CTGFP29279 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CTGFP29279 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTGFP29279 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.89■□□□□ 0.62
CTGFP29279 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.89■□□□□ 0.62
CTGFP29279 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.89■□□□□ 0.62
CTGFP29279 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.89■□□□□ 0.61
CTGFP29279 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CTGFP29279 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CTGFP29279 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 AC098850.1-201ENST00000419919 790 ntBASIC18.89■□□□□ 0.61
CTGFP29279 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.89■□□□□ 0.61
CTGFP29279 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.89■□□□□ 0.61
CTGFP29279 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.89■□□□□ 0.61
CTGFP29279 ELK1P1-201ENST00000485699 580 ntBASIC18.89■□□□□ 0.61
CTGFP29279 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.89■□□□□ 0.61
CTGFP29279 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.89■□□□□ 0.61
CTGFP29279 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.89■□□□□ 0.61
CTGFP29279 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CTGFP29279 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 FRMD8P1-201ENST00000440433 1524 ntBASIC18.89■□□□□ 0.61
CTGFP29279 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTGFP29279 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.89■□□□□ 0.61
CTGFP29279 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.89■□□□□ 0.61
CTGFP29279 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.88■□□□□ 0.61
CTGFP29279 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.88■□□□□ 0.61
CTGFP29279 AC114501.2-201ENST00000439631 535 ntBASIC18.88■□□□□ 0.61
CTGFP29279 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.88■□□□□ 0.61
CTGFP29279 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.88■□□□□ 0.61
CTGFP29279 AL589987.1-201ENST00000453380 819 ntBASIC18.88■□□□□ 0.61
CTGFP29279 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.88■□□□□ 0.61
CTGFP29279 RN7SL618P-201ENST00000477850 296 ntBASIC18.88■□□□□ 0.61
CTGFP29279 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.88■□□□□ 0.61
CTGFP29279 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.88■□□□□ 0.61
CTGFP29279 MIR4525-201ENST00000580000 75 ntBASIC18.88■□□□□ 0.61
CTGFP29279 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.88■□□□□ 0.61
CTGFP29279 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.88■□□□□ 0.61
CTGFP29279 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CTGFP29279 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.88■□□□□ 0.61
CTGFP29279 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTGFP29279 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTGFP29279 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.87■□□□□ 0.61
CTGFP29279 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTGFP29279 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.87■□□□□ 0.61
CTGFP29279 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTGFP29279 ANKRD19P-201ENST00000338192 862 ntBASIC18.87■□□□□ 0.61
CTGFP29279 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CTGFP29279 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTGFP29279 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTGFP29279 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTGFP29279 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms