Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ABCD3P28288 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ABCD3P28288 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ABCD3P28288 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ABCD3P28288 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 MIR574-201ENST00000385209 96 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.65■□□□□ 0.1
ABCD3P28288 MED15P5-201ENST00000423150 992 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.65■□□□□ 0.1
ABCD3P28288 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.65■□□□□ 0.1
ABCD3P28288 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 AC107918.2-201ENST00000530817 355 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCD3P28288 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCD3P28288 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.65■□□□□ 0.1
ABCD3P28288 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 AC140113.2-201ENST00000604370 208 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 AC064836.3-201ENST00000607928 673 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 FAM197Y3-203ENST00000618346 717 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 REXO1L3P-201ENST00000622202 1288 ntBASIC15.65■□□□□ 0.1
ABCD3P28288 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCD3P28288 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
ABCD3P28288 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.65■□□□□ 0.1
ABCD3P28288 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.65■□□□□ 0.1
ABCD3P28288 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.65■□□□□ 0.1
ABCD3P28288 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ABCD3P28288 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
ABCD3P28288 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 IGLL3P-201ENST00000412472 434 ntBASIC15.64■□□□□ 0.09
ABCD3P28288 PMS2P1-201ENST00000431037 1228 ntBASIC15.64■□□□□ 0.09
ABCD3P28288 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 KRT18P58-201ENST00000527480 1120 ntBASIC15.64■□□□□ 0.09
ABCD3P28288 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.64■□□□□ 0.09
ABCD3P28288 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.64■□□□□ 0.09
ABCD3P28288 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.64■□□□□ 0.09
ABCD3P28288 TUBB8P12-201ENST00000308911 1335 ntBASIC15.64■□□□□ 0.09
ABCD3P28288 TUBB7P-202ENST00000428444 1305 ntBASIC15.64■□□□□ 0.09
ABCD3P28288 TUBB8P7-204ENST00000567960 1332 ntBASIC15.64■□□□□ 0.09
ABCD3P28288 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ABCD3P28288 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
ABCD3P28288 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 TOP3BP1-201ENST00000420768 1380 ntBASIC15.63■□□□□ 0.09
ABCD3P28288 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ABCD3P28288 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.63■□□□□ 0.09
ABCD3P28288 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ABCD3P28288 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms