Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFSF4P23510 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFSF4P23510 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFSF4P23510 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFSF4P23510 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 AC008667.4-201ENST00000607370 168 ntBASIC14.57□□□□□ -0.08
TNFSF4P23510 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TNFSF4P23510 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFSF4P23510 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFSF4P23510 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TNFSF4P23510 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TNFSF4P23510 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 AC139713.2-201ENST00000641328 2723 ntBASIC14.56□□□□□ -0.08
TNFSF4P23510 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 MRPL20P1-201ENST00000400819 433 ntBASIC14.56□□□□□ -0.08
TNFSF4P23510 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.56□□□□□ -0.08
TNFSF4P23510 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.56□□□□□ -0.08
TNFSF4P23510 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 AC108751.1-201ENST00000490852 363 ntBASIC14.56□□□□□ -0.08
TNFSF4P23510 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFSF4P23510 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.56□□□□□ -0.08
TNFSF4P23510 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.56□□□□□ -0.08
TNFSF4P23510 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFSF4P23510 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFSF4P23510 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 RPL13AP23-201ENST00000480739 586 ntBASIC14.55□□□□□ -0.08
TNFSF4P23510 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.55□□□□□ -0.08
TNFSF4P23510 RNA5SP415-201ENST00000517246 115 ntBASIC14.55□□□□□ -0.08
TNFSF4P23510 IGHV3-65-201ENST00000523210 341 ntBASIC14.55□□□□□ -0.08
TNFSF4P23510 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFSF4P23510 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFSF4P23510 MIR4751-201ENST00000578027 74 ntBASIC14.55□□□□□ -0.08
TNFSF4P23510 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 Z83851.2-201ENST00000609564 659 ntBASIC14.55□□□□□ -0.08
TNFSF4P23510 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFSF4P23510 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFSF4P23510 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFSF4P23510 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TNFSF4P23510 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms