Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PKM-210ENST00000564178 554 ntTSL 49.31□□□□□ -0.922e-14■■■□□ 14.6
RPS3P23396 TPI1-205ENST00000482209 328 ntTSL 29.7□□□□□ -0.863e-8■■■□□ 14.6
RPS3P23396 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.261e-6■■■□□ 14.6
RPS3P23396 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.341e-6■■■□□ 14.6
RPS3P23396 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.131e-6■■■□□ 14.6
RPS3P23396 SREBF1-204ENST00000395756 3026 ntTSL 217.54■□□□□ 0.41e-7■■■□□ 14.6
RPS3P23396 SREBF1-203ENST00000395751 4653 ntTSL 216.91■□□□□ 0.31e-7■■■□□ 14.6
RPS3P23396 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.191e-7■■■□□ 14.6
RPS3P23396 RPL18-207ENST00000549533 666 ntTSL 216.52■□□□□ 0.245e-27■■■□□ 14.6
RPS3P23396 AP2B1-214ENST00000614600 2285 ntTSL 511.46□□□□□ -0.571e-6■■■□□ 14.6
RPS3P23396 AP2B1-220ENST00000621668 2055 ntTSL 511.1□□□□□ -0.631e-6■■■□□ 14.6
RPS3P23396 AP2B1-212ENST00000612035 2161 ntTSL 59.78□□□□□ -0.841e-6■■■□□ 14.6
RPS3P23396 AP2B1-216ENST00000616784 2542 ntTSL 58.16□□□□□ -1.11e-6■■■□□ 14.6
RPS3P23396 AC090004.1-203ENST00000626721 886 ntTSL 58.96□□□□□ -0.981e-7■■■□□ 14.6
RPS3P23396 CTSB-218ENST00000530624 430 ntTSL 514□□□□□ -0.172e-11■■■□□ 14.6
RPS3P23396 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.75e-7■■■□□ 14.6
RPS3P23396 ACTN4-209ENST00000586538 546 ntTSL 510.87□□□□□ -0.678e-8■■■□□ 14.6
RPS3P23396 ACTB-208ENST00000464611 715 ntTSL 58.45□□□□□ -1.063e-50■■■□□ 14.6
RPS3P23396 POLD1-204ENST00000593981 873 ntTSL 518.59■□□□□ 0.571e-7■■■□□ 14.6
RPS3P23396 TALDO1-209ENST00000533796 503 ntTSL 211.22□□□□□ -0.611e-10■■■□□ 14.6
RPS3P23396 RPL8-204ENST00000526668 717 ntTSL 1 (best)15.66■□□□□ 0.11e-13■■■□□ 14.6
RPS3P23396 UGDH-211ENST00000515021 861 ntTSL 518.05■□□□□ 0.482e-14■■■□□ 14.6
RPS3P23396 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.211e-6■■■□□ 14.6
RPS3P23396 SERPINF2-205ENST00000453723 838 ntTSL 314.74□□□□□ -0.051e-16■■■□□ 14.6
RPS3P23396 EML2-207ENST00000586770 952 ntTSL 213.45□□□□□ -0.261e-7■■■□□ 14.6
RPS3P23396 OS9-222ENST00000552787 962 ntTSL 215.05■□□□□ -04e-7■■■□□ 14.6
RPS3P23396 ANXA2-225ENST00000559780 802 ntTSL 39.45□□□□□ -0.91e-7■■■□□ 14.6
RPS3P23396 ANXA2-220ENST00000559370 521 ntTSL 48.5□□□□□ -1.051e-7■■■□□ 14.6
RPS3P23396 ANXA2-238ENST00000561445 514 ntTSL 58.5□□□□□ -1.051e-7■■■□□ 14.6
RPS3P23396 ANXA2-233ENST00000560468 663 ntTSL 58.5□□□□□ -1.051e-7■■■□□ 14.6
RPS3P23396 ANXA2-227ENST00000559956 558 ntTSL 58.04□□□□□ -1.121e-7■■■□□ 14.6
RPS3P23396 ANXA2-206ENST00000557904 369 ntTSL 37.88□□□□□ -1.151e-7■■■□□ 14.6
RPS3P23396 ANXA2-208ENST00000557937 694 ntTSL 55.2□□□□□ -1.581e-7■■■□□ 14.6
RPS3P23396 ANXA2-221ENST00000559467 755 ntTSL 55.13□□□□□ -1.591e-7■■■□□ 14.6
RPS3P23396 GGCX-210ENST00000496962 684 ntTSL 212.93□□□□□ -0.346e-8■■■□□ 14.6
RPS3P23396 VDAC3-203ENST00000518563 719 ntTSL 225.32■■□□□ 1.642e-8■■■□□ 14.6
RPS3P23396 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.03□□□□□ -0.322e-8■■■□□ 14.6
RPS3P23396 VDAC3-205ENST00000520115 580 ntTSL 412.69□□□□□ -0.382e-8■■■□□ 14.6
RPS3P23396 VDAC3-207ENST00000521348 784 ntTSL 512.14□□□□□ -0.472e-8■■■□□ 14.6
RPS3P23396 VDAC3-209ENST00000522069 625 ntTSL 59.96□□□□□ -0.822e-8■■■□□ 14.6
RPS3P23396 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.32e-8■■■□□ 14.6
RPS3P23396 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.622e-8■■■□□ 14.6
RPS3P23396 VDAC3-202ENST00000518495 531 ntTSL 34.33□□□□□ -1.722e-8■■■□□ 14.6
RPS3P23396 VDAC3-208ENST00000522010 631 ntTSL 52.69□□□□□ -1.982e-8■■■□□ 14.6
RPS3P23396 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.092e-6■■■□□ 14.6
RPS3P23396 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.947e-7■■■□□ 14.6
RPS3P23396 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.583e-9■■■□□ 14.6
RPS3P23396 NECTIN2-203ENST00000585601 650 ntTSL 315.62■□□□□ 0.091e-14■■■□□ 14.6
RPS3P23396 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.287e-7■■■□□ 14.6
RPS3P23396 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.473e-9■■■□□ 14.6
RPS3P23396 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.543e-9■■■□□ 14.6
RPS3P23396 IGDCC3-205ENST00000559947 844 ntTSL 311.01□□□□□ -0.651e-14■■■□□ 14.6
RPS3P23396 ARSE-202ENST00000438544 644 ntTSL 27.99□□□□□ -1.137e-7■■■□□ 14.6
RPS3P23396 CP-214ENST00000497797 606 ntTSL 22.1□□□□□ -2.072e-13■■■□□ 14.6
RPS3P23396 CP-206ENST00000471356 671 ntTSL 21.42□□□□□ -2.182e-13■■■□□ 14.6
RPS3P23396 TKT-206ENST00000460343 7286 ntTSL 211.07□□□□□ -0.644e-7■■■□□ 14.6
RPS3P23396 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.359e-7■■■□□ 14.6
RPS3P23396 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.247e-8■■■□□ 14.6
RPS3P23396 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.311e-7■■■□□ 14.6
RPS3P23396 RAB2A-205ENST00000466595 866 ntTSL 311.69□□□□□ -0.544e-17■■■□□ 14.6
RPS3P23396 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC9.21□□□□□ -0.944e-17■■■□□ 14.6
RPS3P23396 RAB2A-206ENST00000481569 506 ntTSL 26.19□□□□□ -1.424e-17■■■□□ 14.6
RPS3P23396 SLC2A10-203ENST00000611837 586 ntTSL 216.8■□□□□ 0.283e-6■■■□□ 14.6
RPS3P23396 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.173e-6■■■□□ 14.6
RPS3P23396 RACK1-232ENST00000514318 581 ntTSL 315.38■□□□□ 0.057e-19■■■□□ 14.6
RPS3P23396 FBLN1-212ENST00000454279 565 ntTSL 317.37■□□□□ 0.371e-11■■■□□ 14.6
RPS3P23396 FGL1-211ENST00000523097 913 ntTSL 23.33□□□□□ -1.886e-7■■■□□ 14.6
RPS3P23396 WARS-230ENST00000556504 847 ntTSL 510.14□□□□□ -0.792e-7■■■□□ 14.6
RPS3P23396 WARS-205ENST00000553395 801 ntTSL 53.7□□□□□ -1.822e-7■■■□□ 14.6
RPS3P23396 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.14e-6■■■□□ 14.6
RPS3P23396 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -24e-6■■■□□ 14.6
RPS3P23396 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.781e-6■■■□□ 14.6
RPS3P23396 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.441e-6■■■□□ 14.6
RPS3P23396 TAF15-203ENST00000603393 1214 ntTSL 1 (best)17.01■□□□□ 0.311e-6■■■□□ 14.6
RPS3P23396 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.11e-6■■■□□ 14.6
RPS3P23396 TAF15-202ENST00000603346 702 ntTSL 26.08□□□□□ -1.441e-6■■■□□ 14.6
RPS3P23396 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.781e-6■■■□□ 14.6
RPS3P23396 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.291e-6■■■□□ 14.6
RPS3P23396 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.111e-6■■■□□ 14.6
RPS3P23396 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.71e-6■■■□□ 14.6
RPS3P23396 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.91■■□□□ 1.12e-10■■■□□ 14.6
RPS3P23396 ERGIC3-210ENST00000451605 520 ntTSL 29.39□□□□□ -0.917e-8■■□□□ 14.5
RPS3P23396 YARS-209ENST00000490826 2178 ntTSL 212.83□□□□□ -0.366e-17■■□□□ 14.5
RPS3P23396 YARS-203ENST00000469100 2247 ntTSL 210.58□□□□□ -0.726e-17■■□□□ 14.5
RPS3P23396 PROC-204ENST00000419985 500 ntTSL 421.32■■□□□ 12e-10■■□□□ 14.5
RPS3P23396 PROC-206ENST00000429925 581 ntTSL 314.08□□□□□ -0.162e-10■■□□□ 14.5
RPS3P23396 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.04■□□□□ 0.961e-11■■□□□ 14.5
RPS3P23396 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.678e-7■■□□□ 14.5
RPS3P23396 JUP-205ENST00000424457 949 ntTSL 314.71□□□□□ -0.051e-6■■□□□ 14.5
RPS3P23396 DDX6-205ENST00000533239 738 ntTSL 215.69■□□□□ 0.14e-17■■□□□ 14.5
RPS3P23396 EIF3G-209ENST00000589674 596 ntTSL 212.42□□□□□ -0.426e-8■■□□□ 14.5
RPS3P23396 DDX6-204ENST00000531971 4373 ntTSL 37.28□□□□□ -1.244e-17■■□□□ 14.5
RPS3P23396 FLNA-214ENST00000474072 430 ntTSL 216.48■□□□□ 0.233e-17■■□□□ 14.5
RPS3P23396 PTBP1-206ENST00000585856 1217 ntTSL 225.39■■□□□ 1.662e-8■■□□□ 14.5
RPS3P23396 TBCB-202ENST00000392178 791 ntTSL 222.51■■□□□ 1.192e-8■■□□□ 14.5
RPS3P23396 TBCB-208ENST00000588385 776 ntTSL 1 (best)20.78■□□□□ 0.922e-8■■□□□ 14.5
RPS3P23396 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.852e-8■■□□□ 14.5
RPS3P23396 TBCB-209ENST00000589308 659 ntTSL 318.22■□□□□ 0.512e-8■■□□□ 14.5
RPS3P23396 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.11■□□□□ 0.332e-8■■□□□ 14.5
RPS3P23396 TBCB-206ENST00000585910 656 ntTSL 215.59■□□□□ 0.092e-8■■□□□ 14.5
Retrieved 100 of 24,271 protein–RNA pairs in 318.1 ms