Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RFX1P22670 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RFX1P22670 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX1P22670 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.53■□□□□ 0.56
RFX1P22670 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX1P22670 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFX1P22670 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX1P22670 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX1P22670 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX1P22670 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX1P22670 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 AC106886.4-201ENST00000623557 2502 ntBASIC18.53■□□□□ 0.56
RFX1P22670 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX1P22670 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFX1P22670 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX1P22670 AC005915.1-201ENST00000624912 2018 ntBASIC18.52■□□□□ 0.56
RFX1P22670 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX1P22670 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.52■□□□□ 0.56
RFX1P22670 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 AP005117.1-201ENST00000584346 1413 ntBASIC18.52■□□□□ 0.56
RFX1P22670 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.52■□□□□ 0.56
RFX1P22670 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RFX1P22670 AC007967.2-201ENST00000432613 625 ntBASIC18.52■□□□□ 0.56
RFX1P22670 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.52■□□□□ 0.56
RFX1P22670 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RFX1P22670 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX1P22670 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RFX1P22670 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX1P22670 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
RFX1P22670 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX1P22670 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX1P22670 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.55
RFX1P22670 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX1P22670 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX1P22670 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.52■□□□□ 0.55
RFX1P22670 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RFX1P22670 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFX1P22670 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RFX1P22670 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX1P22670 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX1P22670 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX1P22670 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RFX1P22670 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 AC211486.1-202ENST00000416371 468 ntBASIC18.51■□□□□ 0.55
RFX1P22670 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RFX1P22670 AC211476.1-201ENST00000503899 468 ntBASIC18.51■□□□□ 0.55
RFX1P22670 AP002490.2-201ENST00000524791 560 ntBASIC18.51■□□□□ 0.55
RFX1P22670 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX1P22670 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RFX1P22670 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 TUBB8P12-201ENST00000308911 1335 ntBASIC18.5■□□□□ 0.55
RFX1P22670 TUBB7P-202ENST00000428444 1305 ntBASIC18.5■□□□□ 0.55
RFX1P22670 TUBB8P7-204ENST00000567960 1332 ntBASIC18.5■□□□□ 0.55
RFX1P22670 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX1P22670 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX1P22670 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX1P22670 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX1P22670 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX1P22670 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX1P22670 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX1P22670 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX1P22670 AC105339.3-201ENST00000560043 636 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms