Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM21P19474 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM21P19474 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM21P19474 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
TRIM21P19474 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM21P19474 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM21P19474 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM21P19474 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
TRIM21P19474 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM21P19474 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM21P19474 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM21P19474 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM21P19474 AC004870.1-201ENST00000315132 882 ntBASIC18.79■□□□□ 0.6
TRIM21P19474 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM21P19474 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM21P19474 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 DUSP5P1-201ENST00000441325 1139 ntBASIC18.79■□□□□ 0.6
TRIM21P19474 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM21P19474 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM21P19474 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM21P19474 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.79■□□□□ 0.6
TRIM21P19474 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 AC012313.10-201ENST00000623509 926 ntBASIC18.79■□□□□ 0.6
TRIM21P19474 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.79■□□□□ 0.6
TRIM21P19474 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM21P19474 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.79■□□□□ 0.6
TRIM21P19474 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM21P19474 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM21P19474 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM21P19474 AL603756.1-201ENST00000606511 2163 ntBASIC18.78■□□□□ 0.6
TRIM21P19474 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM21P19474 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRIM21P19474 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM21P19474 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRIM21P19474 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM21P19474 RBM17P3-201ENST00000417687 1192 ntBASIC18.78■□□□□ 0.6
TRIM21P19474 TPM4P1-201ENST00000436100 807 ntBASIC18.78■□□□□ 0.6
TRIM21P19474 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRIM21P19474 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM21P19474 IFNL4P1-201ENST00000607083 540 ntBASIC18.78■□□□□ 0.6
TRIM21P19474 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 AC092171.3-201ENST00000610122 2651 ntBASIC18.78■□□□□ 0.6
TRIM21P19474 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM21P19474 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM21P19474 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 AL353593.2-201ENST00000602529 1483 ntBASIC18.77■□□□□ 0.6
TRIM21P19474 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM21P19474 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM21P19474 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM21P19474 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM21P19474 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM21P19474 AL135999.2-201ENST00000622438 1686 ntBASIC18.77■□□□□ 0.6
TRIM21P19474 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM21P19474 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM21P19474 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms