Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC114501.2-201ENST00000439631 535 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.45■□□□□ 0.86
COL11A2P13942 AL589987.1-201ENST00000453380 819 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COL11A2P13942 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
COL11A2P13942 AC023310.3-201ENST00000557027 670 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 AC100756.1-201ENST00000562736 682 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 AC138749.3-201ENST00000567691 622 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.45■□□□□ 0.86
COL11A2P13942 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
COL11A2P13942 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.45■□□□□ 0.86
COL11A2P13942 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.45■□□□□ 0.86
COL11A2P13942 AC116165.1-201ENST00000611806 668 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.45■□□□□ 0.86
COL11A2P13942 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.45■□□□□ 0.86
COL11A2P13942 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL11A2P13942 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 AL023806.1-201ENST00000603994 1649 ntBASIC20.45■□□□□ 0.86
COL11A2P13942 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
COL11A2P13942 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.45■□□□□ 0.86
COL11A2P13942 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL11A2P13942 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL11A2P13942 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.44■□□□□ 0.86
COL11A2P13942 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COL11A2P13942 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 ANKRD19P-201ENST00000338192 862 ntBASIC20.44■□□□□ 0.86
COL11A2P13942 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.44■□□□□ 0.86
COL11A2P13942 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.44■□□□□ 0.86
COL11A2P13942 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.44■□□□□ 0.86
COL11A2P13942 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.44■□□□□ 0.86
COL11A2P13942 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.44■□□□□ 0.86
COL11A2P13942 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.44■□□□□ 0.86
COL11A2P13942 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.44■□□□□ 0.86
COL11A2P13942 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
COL11A2P13942 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.44■□□□□ 0.86
COL11A2P13942 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.44■□□□□ 0.86
COL11A2P13942 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COL11A2P13942 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.44■□□□□ 0.86
COL11A2P13942 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.44■□□□□ 0.86
COL11A2P13942 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.44■□□□□ 0.86
COL11A2P13942 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.44■□□□□ 0.86
COL11A2P13942 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL11A2P13942 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.44■□□□□ 0.86
COL11A2P13942 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.43■□□□□ 0.86
COL11A2P13942 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 AL671710.1-201ENST00000610245 2349 ntBASIC20.43■□□□□ 0.86
COL11A2P13942 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COL11A2P13942 SNX33P1-201ENST00000592116 1762 ntBASIC20.43■□□□□ 0.86
COL11A2P13942 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.43■□□□□ 0.86
COL11A2P13942 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.43■□□□□ 0.86
COL11A2P13942 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.43■□□□□ 0.86
COL11A2P13942 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.43■□□□□ 0.86
COL11A2P13942 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.43■□□□□ 0.86
COL11A2P13942 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.43■□□□□ 0.86
COL11A2P13942 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL11A2P13942 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.42■□□□□ 0.86
COL11A2P13942 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COL11A2P13942 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.42■□□□□ 0.86
COL11A2P13942 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 DOC2GP-202ENST00000514950 1163 ntBASIC20.42■□□□□ 0.86
COL11A2P13942 RAB43P1-201ENST00000561790 589 ntBASIC20.42■□□□□ 0.86
COL11A2P13942 AC061975.2-201ENST00000581722 295 ntBASIC20.42■□□□□ 0.86
COL11A2P13942 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.42■□□□□ 0.86
COL11A2P13942 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.42■□□□□ 0.86
COL11A2P13942 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.42■□□□□ 0.86
COL11A2P13942 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.42■□□□□ 0.86
COL11A2P13942 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
COL11A2P13942 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms