Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.66■□□□□ 0.1
BMP4P12644 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.66■□□□□ 0.1
BMP4P12644 Z69720.1-201ENST00000601483 472 ntBASIC15.66■□□□□ 0.1
BMP4P12644 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BMP4P12644 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 AL365203.3-201ENST00000609742 2057 ntBASIC15.65■□□□□ 0.1
BMP4P12644 AC004870.1-201ENST00000315132 882 ntBASIC15.65■□□□□ 0.1
BMP4P12644 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.65■□□□□ 0.1
BMP4P12644 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 LINC00265-3P-201ENST00000447588 903 ntBASIC15.65■□□□□ 0.1
BMP4P12644 AC104819.1-201ENST00000504587 486 ntBASIC15.65■□□□□ 0.1
BMP4P12644 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.65■□□□□ 0.1
BMP4P12644 AC012615.1-201ENST00000565797 1299 ntBASIC15.65■□□□□ 0.1
BMP4P12644 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.65■□□□□ 0.1
BMP4P12644 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.65■□□□□ 0.1
BMP4P12644 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.65■□□□□ 0.1
BMP4P12644 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BMP4P12644 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BMP4P12644 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
BMP4P12644 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.64■□□□□ 0.09
BMP4P12644 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 AL163051.1-201ENST00000569214 1512 ntBASIC15.64■□□□□ 0.09
BMP4P12644 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.64■□□□□ 0.09
BMP4P12644 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.64■□□□□ 0.09
BMP4P12644 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
BMP4P12644 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BMP4P12644 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms