Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 MIR661-201ENST00000384842 89 ntBASIC17.5■□□□□ 0.39
RHOP08100 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RHOP08100 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.5■□□□□ 0.39
RHOP08100 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.5■□□□□ 0.39
RHOP08100 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.5■□□□□ 0.39
RHOP08100 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
RHOP08100 CYP2A7P1-201ENST00000595391 815 ntBASIC17.5■□□□□ 0.39
RHOP08100 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.5■□□□□ 0.39
RHOP08100 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RHOP08100 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHOP08100 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 AL138688.1-201ENST00000624851 1594 ntBASIC17.49■□□□□ 0.39
RHOP08100 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.49■□□□□ 0.39
RHOP08100 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHOP08100 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHOP08100 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 TERF1P3-201ENST00000505638 1227 ntBASIC17.49■□□□□ 0.39
RHOP08100 AC097493.3-201ENST00000509725 367 ntBASIC17.49■□□□□ 0.39
RHOP08100 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.49■□□□□ 0.39
RHOP08100 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 MIR4453-201ENST00000584019 89 ntBASIC17.49■□□□□ 0.39
RHOP08100 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.49■□□□□ 0.39
RHOP08100 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.49■□□□□ 0.39
RHOP08100 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.49■□□□□ 0.39
RHOP08100 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHOP08100 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
RHOP08100 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.49■□□□□ 0.39
RHOP08100 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.48■□□□□ 0.39
RHOP08100 LINC00896-202ENST00000609602 2128 ntBASIC17.48■□□□□ 0.39
RHOP08100 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.48■□□□□ 0.39
RHOP08100 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.48■□□□□ 0.39
RHOP08100 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.48■□□□□ 0.39
RHOP08100 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.48■□□□□ 0.39
RHOP08100 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RHOP08100 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RHOP08100 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RHOP08100 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.48■□□□□ 0.39
RHOP08100 AL512638.1-201ENST00000457493 794 ntBASIC17.48■□□□□ 0.39
RHOP08100 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RHOP08100 MIR4492-201ENST00000581627 80 ntBASIC17.48■□□□□ 0.39
RHOP08100 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.48■□□□□ 0.39
RHOP08100 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 AC021097.1-201ENST00000607902 574 ntBASIC17.48■□□□□ 0.39
RHOP08100 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.48■□□□□ 0.39
RHOP08100 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RHOP08100 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.48■□□□□ 0.39
RHOP08100 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOP08100 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.48■□□□□ 0.39
RHOP08100 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.47■□□□□ 0.39
RHOP08100 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RHOP08100 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOP08100 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms