Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
CD74P04233 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.33□□□□□ -0.12
CD74P04233 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 GPR32P1-201ENST00000601788 811 ntBASIC14.33□□□□□ -0.12
CD74P04233 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
CD74P04233 AC066615.1-201ENST00000640911 628 ntBASIC14.33□□□□□ -0.12
CD74P04233 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 TSPY26P-202ENST00000565928 3884 ntBASIC14.33□□□□□ -0.12
CD74P04233 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CD74P04233 AC009336.1-201ENST00000608941 1553 ntBASIC14.33□□□□□ -0.12
CD74P04233 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.33□□□□□ -0.12
CD74P04233 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CD74P04233 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CD74P04233 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 PRORSD1P-201ENST00000295112 541 ntBASIC14.32□□□□□ -0.12
CD74P04233 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.32□□□□□ -0.12
CD74P04233 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.32□□□□□ -0.12
CD74P04233 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.32□□□□□ -0.12
CD74P04233 DUX4L17-201ENST00000557360 1267 ntBASIC14.32□□□□□ -0.12
CD74P04233 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.32□□□□□ -0.12
CD74P04233 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.32□□□□□ -0.12
CD74P04233 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.32□□□□□ -0.12
CD74P04233 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD74P04233 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
CD74P04233 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD74P04233 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
CD74P04233 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
CD74P04233 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.31□□□□□ -0.12
CD74P04233 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD74P04233 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms