Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC190387.1-201ENST00000551683 408 ntBASIC20.53■□□□□ 0.88
COL4A1P02462 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.53■□□□□ 0.88
COL4A1P02462 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.53■□□□□ 0.88
COL4A1P02462 AC008738.7-201ENST00000609744 511 ntBASIC20.53■□□□□ 0.88
COL4A1P02462 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.53■□□□□ 0.88
COL4A1P02462 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
COL4A1P02462 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A1P02462 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A1P02462 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A1P02462 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A1P02462 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.53■□□□□ 0.88
COL4A1P02462 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
COL4A1P02462 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A1P02462 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL4A1P02462 AL021920.2-201ENST00000624828 1351 ntBASIC20.53■□□□□ 0.88
COL4A1P02462 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.52■□□□□ 0.88
COL4A1P02462 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.52■□□□□ 0.88
COL4A1P02462 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.52■□□□□ 0.88
COL4A1P02462 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A1P02462 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
COL4A1P02462 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A1P02462 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.52■□□□□ 0.88
COL4A1P02462 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A1P02462 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
COL4A1P02462 AC018470.1-201ENST00000624790 3129 ntBASIC20.52■□□□□ 0.87
COL4A1P02462 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.52■□□□□ 0.87
COL4A1P02462 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.52■□□□□ 0.87
COL4A1P02462 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 AC141586.5-201ENST00000624546 2050 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A1P02462 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A1P02462 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.51■□□□□ 0.87
COL4A1P02462 AC018529.1-201ENST00000613063 361 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 TEX28P1-201ENST00000613479 1221 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 TEX28P2-201ENST00000617764 1221 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL4A1P02462 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 AC060834.1-201ENST00000443027 2032 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A1P02462 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL4A1P02462 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A1P02462 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL4A1P02462 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A1P02462 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A1P02462 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.51■□□□□ 0.87
COL4A1P02462 AC022144.1-201ENST00000602255 1580 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 FAM220BP-201ENST00000377689 816 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 AC005034.1-201ENST00000426657 489 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A1P02462 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.51■□□□□ 0.87
COL4A1P02462 AC021097.1-201ENST00000607902 574 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 AL133215.2-201ENST00000609242 977 ntBASIC20.51■□□□□ 0.87
COL4A1P02462 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A1P02462 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL4A1P02462 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL4A1P02462 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL4A1P02462 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A1P02462 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A1P02462 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A1P02462 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A1P02462 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A1P02462 HLA-J-202ENST00000469281 1241 ntBASIC20.5■□□□□ 0.87
COL4A1P02462 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A1P02462 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A1P02462 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL4A1P02462 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A1P02462 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A1P02462 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL4A1P02462 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A1P02462 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A1P02462 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A1P02462 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL4A1P02462 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms