Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PDGFBP01127 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDGFBP01127 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFBP01127 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFBP01127 ZNF890P-202ENST00000530367 1156 ntBASIC16.9■□□□□ 0.3
PDGFBP01127 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFBP01127 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDGFBP01127 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFBP01127 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFBP01127 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFBP01127 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.3
PDGFBP01127 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFBP01127 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PDGFBP01127 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
PDGFBP01127 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFBP01127 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFBP01127 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFBP01127 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFBP01127 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.89■□□□□ 0.29
PDGFBP01127 MIR1908-201ENST00000410394 80 ntBASIC16.89■□□□□ 0.29
PDGFBP01127 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFBP01127 RN7SL618P-201ENST00000477850 296 ntBASIC16.89■□□□□ 0.29
PDGFBP01127 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.89■□□□□ 0.29
PDGFBP01127 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PDGFBP01127 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.89■□□□□ 0.29
PDGFBP01127 AC008735.3-201ENST00000596646 500 ntBASIC16.89■□□□□ 0.29
PDGFBP01127 MIR6869-201ENST00000619434 62 ntBASIC16.89■□□□□ 0.29
PDGFBP01127 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDGFBP01127 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.89■□□□□ 0.29
PDGFBP01127 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PDGFBP01127 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFBP01127 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PDGFBP01127 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFBP01127 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFBP01127 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 AC098850.1-201ENST00000419919 790 ntBASIC16.88■□□□□ 0.29
PDGFBP01127 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.88■□□□□ 0.29
PDGFBP01127 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 KRT18P34-201ENST00000488218 1270 ntBASIC16.88■□□□□ 0.29
PDGFBP01127 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFBP01127 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFBP01127 AC055876.2-201ENST00000531834 546 ntBASIC16.88■□□□□ 0.29
PDGFBP01127 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFBP01127 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.88■□□□□ 0.29
PDGFBP01127 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFBP01127 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
PDGFBP01127 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFBP01127 TOP3BP1-201ENST00000420768 1380 ntBASIC16.88■□□□□ 0.29
PDGFBP01127 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFBP01127 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFBP01127 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms