Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CEACAM4O75871 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CEACAM4O75871 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.3■□□□□ 0.04
CEACAM4O75871 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.3■□□□□ 0.04
CEACAM4O75871 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 HLA-H-201ENST00000383620 1096 ntBASIC15.3■□□□□ 0.04
CEACAM4O75871 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.3■□□□□ 0.04
CEACAM4O75871 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.3■□□□□ 0.04
CEACAM4O75871 AL035456.1-201ENST00000456064 1369 ntBASIC15.3■□□□□ 0.04
CEACAM4O75871 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.3■□□□□ 0.04
CEACAM4O75871 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CEACAM4O75871 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.3■□□□□ 0.04
CEACAM4O75871 AC003101.2-201ENST00000612557 442 ntBASIC15.3■□□□□ 0.04
CEACAM4O75871 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CEACAM4O75871 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CEACAM4O75871 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.3■□□□□ 0.04
CEACAM4O75871 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CEACAM4O75871 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.29■□□□□ 0.04
CEACAM4O75871 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.29■□□□□ 0.04
CEACAM4O75871 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 AL138688.1-201ENST00000624851 1594 ntBASIC15.29■□□□□ 0.04
CEACAM4O75871 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 PRYP6-201ENST00000514804 343 ntBASIC15.29■□□□□ 0.04
CEACAM4O75871 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.29■□□□□ 0.04
CEACAM4O75871 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CEACAM4O75871 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.29■□□□□ 0.04
CEACAM4O75871 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CEACAM4O75871 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.29■□□□□ 0.04
CEACAM4O75871 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CEACAM4O75871 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CEACAM4O75871 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.28■□□□□ 0.04
CEACAM4O75871 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CEACAM4O75871 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.28■□□□□ 0.04
CEACAM4O75871 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 FAM220BP-201ENST00000377689 816 ntBASIC15.28■□□□□ 0.04
CEACAM4O75871 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.28■□□□□ 0.04
CEACAM4O75871 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.28■□□□□ 0.04
CEACAM4O75871 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 SPTLC1P1-201ENST00000447199 261 ntBASIC15.28■□□□□ 0.04
CEACAM4O75871 AC009477.1-201ENST00000452936 217 ntBASIC15.28■□□□□ 0.04
CEACAM4O75871 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CEACAM4O75871 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms