Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFPL1O75677 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.08■□□□□ 0.33
RFPL1O75677 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.08■□□□□ 0.33
RFPL1O75677 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFPL1O75677 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFPL1O75677 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RFPL1O75677 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RFPL1O75677 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.08■□□□□ 0.32
RFPL1O75677 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RFPL1O75677 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RFPL1O75677 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 IGHV3-47-201ENST00000425060 335 ntBASIC17.08■□□□□ 0.32
RFPL1O75677 SAPCD2P3-201ENST00000455031 850 ntBASIC17.08■□□□□ 0.32
RFPL1O75677 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.08■□□□□ 0.32
RFPL1O75677 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.08■□□□□ 0.32
RFPL1O75677 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.08■□□□□ 0.32
RFPL1O75677 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.08■□□□□ 0.32
RFPL1O75677 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.08■□□□□ 0.32
RFPL1O75677 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.08■□□□□ 0.32
RFPL1O75677 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.08■□□□□ 0.32
RFPL1O75677 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 AL513523.2-202ENST00000427283 2040 ntBASIC17.08■□□□□ 0.32
RFPL1O75677 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.08■□□□□ 0.32
RFPL1O75677 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFPL1O75677 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 AC003669.1-201ENST00000334569 611 ntBASIC17.07■□□□□ 0.32
RFPL1O75677 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 MRPL3P1-201ENST00000400109 1033 ntBASIC17.07■□□□□ 0.32
RFPL1O75677 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.07■□□□□ 0.32
RFPL1O75677 AC091607.1-201ENST00000490318 1060 ntBASIC17.07■□□□□ 0.32
RFPL1O75677 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.07■□□□□ 0.32
RFPL1O75677 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.07■□□□□ 0.32
RFPL1O75677 AC064862.7-201ENST00000604520 867 ntBASIC17.07■□□□□ 0.32
RFPL1O75677 AC120114.3-201ENST00000611923 658 ntBASIC17.07■□□□□ 0.32
RFPL1O75677 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.07■□□□□ 0.32
RFPL1O75677 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RFPL1O75677 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RFPL1O75677 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
RFPL1O75677 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFPL1O75677 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.06■□□□□ 0.32
RFPL1O75677 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.06■□□□□ 0.32
RFPL1O75677 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFPL1O75677 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RFPL1O75677 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.06■□□□□ 0.32
RFPL1O75677 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFPL1O75677 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.06■□□□□ 0.32
RFPL1O75677 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.06■□□□□ 0.32
RFPL1O75677 NUS1P2-201ENST00000417358 873 ntBASIC17.06■□□□□ 0.32
RFPL1O75677 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms