Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.78■□□□□ 0.6
LGR5O75473 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.78■□□□□ 0.6
LGR5O75473 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.78■□□□□ 0.6
LGR5O75473 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LGR5O75473 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.78■□□□□ 0.6
LGR5O75473 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LGR5O75473 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.78■□□□□ 0.6
LGR5O75473 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
LGR5O75473 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LGR5O75473 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LGR5O75473 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LGR5O75473 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.77■□□□□ 0.6
LGR5O75473 PMS2P4-201ENST00000412466 1052 ntBASIC18.77■□□□□ 0.6
LGR5O75473 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 FAM86GP-201ENST00000448322 971 ntBASIC18.77■□□□□ 0.6
LGR5O75473 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LGR5O75473 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.77■□□□□ 0.6
LGR5O75473 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.77■□□□□ 0.6
LGR5O75473 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.77■□□□□ 0.6
LGR5O75473 AC005498.2-205ENST00000593218 784 ntBASIC18.77■□□□□ 0.6
LGR5O75473 AC009093.7-201ENST00000623853 1223 ntBASIC18.77■□□□□ 0.6
LGR5O75473 AP001350.2-201ENST00000625104 1094 ntBASIC18.77■□□□□ 0.6
LGR5O75473 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.77■□□□□ 0.6
LGR5O75473 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.77■□□□□ 0.6
LGR5O75473 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LGR5O75473 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LGR5O75473 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.77■□□□□ 0.59
LGR5O75473 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LGR5O75473 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LGR5O75473 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LGR5O75473 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LGR5O75473 AC108860.2-201ENST00000562760 2183 ntBASIC18.76■□□□□ 0.59
LGR5O75473 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
LGR5O75473 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
LGR5O75473 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LGR5O75473 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.76■□□□□ 0.59
LGR5O75473 AL592309.1-201ENST00000443127 649 ntBASIC18.76■□□□□ 0.59
LGR5O75473 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.76■□□□□ 0.59
LGR5O75473 LINC01225-203ENST00000563550 1244 ntBASIC18.76■□□□□ 0.59
LGR5O75473 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LGR5O75473 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LGR5O75473 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 CYP2A7P1-201ENST00000595391 815 ntBASIC18.76■□□□□ 0.59
LGR5O75473 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.76■□□□□ 0.59
LGR5O75473 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LGR5O75473 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms