Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PTP4A3O75365 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTP4A3O75365 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.33■□□□□ 0.05
PTP4A3O75365 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.33■□□□□ 0.04
PTP4A3O75365 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PTP4A3O75365 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A3O75365 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A3O75365 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.33■□□□□ 0.04
PTP4A3O75365 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A3O75365 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 AC132008.2-207ENST00000454517 770 ntBASIC15.33■□□□□ 0.04
PTP4A3O75365 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A3O75365 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A3O75365 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.33■□□□□ 0.04
PTP4A3O75365 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.33■□□□□ 0.04
PTP4A3O75365 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 AL358472.4-201ENST00000633140 710 ntBASIC15.33■□□□□ 0.04
PTP4A3O75365 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
PTP4A3O75365 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A3O75365 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
PTP4A3O75365 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A3O75365 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 KRT8P49-201ENST00000604166 1432 ntBASIC15.33■□□□□ 0.04
PTP4A3O75365 C8orf49-201ENST00000525043 1968 ntBASIC15.33■□□□□ 0.04
PTP4A3O75365 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A3O75365 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 AC006538.1-201ENST00000567905 1585 ntBASIC15.32■□□□□ 0.04
PTP4A3O75365 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.32■□□□□ 0.04
PTP4A3O75365 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTP4A3O75365 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.32■□□□□ 0.04
PTP4A3O75365 HLA-J-202ENST00000469281 1241 ntBASIC15.32■□□□□ 0.04
PTP4A3O75365 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PTP4A3O75365 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 AC069148.1-201ENST00000608741 768 ntBASIC15.32■□□□□ 0.04
PTP4A3O75365 AC092119.3-201ENST00000612618 583 ntBASIC15.32■□□□□ 0.04
PTP4A3O75365 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.32■□□□□ 0.04
PTP4A3O75365 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 AC243591.1-201ENST00000452967 1364 ntBASIC15.32■□□□□ 0.04
PTP4A3O75365 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 AL662844.4-201ENST00000606367 2838 ntBASIC15.32■□□□□ 0.04
PTP4A3O75365 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A3O75365 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A3O75365 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.31■□□□□ 0.04
PTP4A3O75365 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 ALOX12P2-203ENST00000570921 1945 ntBASIC15.31■□□□□ 0.04
PTP4A3O75365 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms