Protein–RNA interactions for Protein: O60613

SELENOF, Selenoprotein F, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOFO60613 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SELENOFO60613 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SELENOFO60613 AC068418.2-201ENST00000577309 3703 ntBASIC15.21■□□□□ 0.03
SELENOFO60613 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SELENOFO60613 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SELENOFO60613 AC016734.2-201ENST00000624325 1377 ntBASIC15.21■□□□□ 0.02
SELENOFO60613 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SELENOFO60613 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SELENOFO60613 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SELENOFO60613 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SELENOFO60613 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 AC005332.1-201ENST00000577698 1310 ntBASIC15.2■□□□□ 0.02
SELENOFO60613 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 PCDHA1-201ENST00000378133 2726 ntBASIC15.2■□□□□ 0.02
SELENOFO60613 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 AL031133.1-201ENST00000406807 723 ntBASIC15.2■□□□□ 0.02
SELENOFO60613 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.2■□□□□ 0.02
SELENOFO60613 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.2■□□□□ 0.02
SELENOFO60613 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.2■□□□□ 0.02
SELENOFO60613 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SELENOFO60613 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SELENOFO60613 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.2■□□□□ 0.02
SELENOFO60613 AC092364.2-201ENST00000596710 2692 ntBASIC15.2■□□□□ 0.02
SELENOFO60613 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.19■□□□□ 0.02
SELENOFO60613 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AL391256.1-201ENST00000443260 1855 ntBASIC15.19■□□□□ 0.02
SELENOFO60613 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SELENOFO60613 AC148477.5-201ENST00000625164 1645 ntBASIC15.19■□□□□ 0.02
SELENOFO60613 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SELENOFO60613 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.19■□□□□ 0.02
SELENOFO60613 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.19■□□□□ 0.02
SELENOFO60613 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AC096582.2-201ENST00000510860 516 ntBASIC15.19■□□□□ 0.02
SELENOFO60613 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.19■□□□□ 0.02
SELENOFO60613 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.19■□□□□ 0.02
SELENOFO60613 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AL121956.5-201ENST00000625261 221 ntBASIC15.19■□□□□ 0.02
SELENOFO60613 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AC233702.3-201ENST00000578656 1387 ntBASIC15.19■□□□□ 0.02
SELENOFO60613 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.19■□□□□ 0.02
SELENOFO60613 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
SELENOFO60613 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
SELENOFO60613 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SELENOFO60613 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms