Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
NDUFA1O15239 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.68□□□□□ -0.54
NDUFA1O15239 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 AC004263.2-201ENST00000617183 678 ntBASIC11.68□□□□□ -0.54
NDUFA1O15239 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 AC024909.3-201ENST00000611513 2257 ntBASIC11.68□□□□□ -0.54
NDUFA1O15239 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.68□□□□□ -0.54
NDUFA1O15239 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
NDUFA1O15239 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.67□□□□□ -0.54
NDUFA1O15239 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 AC002558.1-201ENST00000488906 803 ntBASIC11.67□□□□□ -0.54
NDUFA1O15239 AC112698.1-201ENST00000510299 916 ntBASIC11.67□□□□□ -0.54
NDUFA1O15239 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.67□□□□□ -0.54
NDUFA1O15239 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
NDUFA1O15239 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 AC005052.1-201ENST00000625181 2492 ntBASIC11.67□□□□□ -0.54
NDUFA1O15239 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NDUFA1O15239 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms