Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 AL033527.5-202ENST00000641632 1098 ntBASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEM88BA6NKF7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 SLC25A47P1-201ENST00000531577 414 ntBASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 MPDU1-223ENST00000582151 728 ntBASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM88BA6NKF7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 FO681548.1-201ENST00000455617 1132 ntBASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 AP000997.3-201ENST00000623333 2250 ntBASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88BA6NKF7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 CDC14C-201ENST00000428251 1719 ntBASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 AC007551.1-201ENST00000457394 519 ntBASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TMEM88BA6NKF7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM88BA6NKF7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms