Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC19.69■□□□□ 0.74
GOLGA6L4A6NEF3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 AL645929.1-201ENST00000420084 975 ntBASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 RN7SL606P-201ENST00000472779 293 ntBASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 AC090616.6-201ENST00000582640 721 ntBASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 AC073912.3-201ENST00000624414 853 ntBASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GOLGA6L4A6NEF3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 AC009336.1-201ENST00000608941 1553 ntBASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 LINC02199-201ENST00000506655 2702 ntBASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 AC006011.2-201ENST00000621313 1158 ntBASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
GOLGA6L4A6NEF3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 FRMD8P1-201ENST00000440433 1524 ntBASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GOLGA6L4A6NEF3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms