Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 HYMAI-201ENST00000635591 3347 ntBASIC18.09■□□□□ 0.49
RCCD1A6NED2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 RCN1P1-201ENST00000400413 996 ntBASIC18.09■□□□□ 0.49
RCCD1A6NED2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 CHCHD2P8-201ENST00000429873 447 ntBASIC18.09■□□□□ 0.49
RCCD1A6NED2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 AP000867.4-201ENST00000641616 219 ntBASIC18.09■□□□□ 0.49
RCCD1A6NED2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RCCD1A6NED2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RCCD1A6NED2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.08■□□□□ 0.49
RCCD1A6NED2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RCCD1A6NED2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RCCD1A6NED2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RCCD1A6NED2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RCCD1A6NED2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RCCD1A6NED2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RCCD1A6NED2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RCCD1A6NED2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
RCCD1A6NED2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RCCD1A6NED2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.08■□□□□ 0.48
RCCD1A6NED2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 AL031133.1-201ENST00000406807 723 ntBASIC18.07■□□□□ 0.48
RCCD1A6NED2 SPDYE21P-201ENST00000413323 827 ntBASIC18.07■□□□□ 0.48
RCCD1A6NED2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 AP002383.4-201ENST00000442518 975 ntBASIC18.07■□□□□ 0.48
RCCD1A6NED2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 AC097637.2-201ENST00000624096 1997 ntBASIC18.07■□□□□ 0.48
RCCD1A6NED2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RCCD1A6NED2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
RCCD1A6NED2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms