Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.21■□□□□ 0.51
CTAGE9A4FU28 ME2P1-201ENST00000426028 1970 ntBASIC18.21■□□□□ 0.5
CTAGE9A4FU28 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.2■□□□□ 0.5
CTAGE9A4FU28 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 HLA-F-220ENST00000434407 884 ntBASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AC111152.3-201ENST00000569699 673 ntBASIC18.19■□□□□ 0.5
CTAGE9A4FU28 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CTAGE9A4FU28 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms