Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 AC091304.2-201ENST00000564639 760 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 LINC01711-201ENST00000598340 967 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SIGLEC16-201ENST00000599858 1437 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 TSPY19P-201ENST00000418461 509 ntBASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 TSPY18P-201ENST00000441642 509 ntBASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AC132008.2-207ENST00000454517 770 ntBASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AC106795.1-205ENST00000512851 1056 ntBASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AC073592.4-201ENST00000623827 446 ntBASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 AP005117.1-201ENST00000584346 1413 ntBASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DRB4X5D2U9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 AL135999.2-201ENST00000622438 1686 ntBASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 AC093525.9-201ENST00000624961 1746 ntBASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 KRT18P56-201ENST00000507275 550 ntBASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DRB4X5D2U9 CLEC4GP1-201ENST00000596555 870 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms